PMID | Allele | Disease | Population | Drug Names | SNP | Class | Sentence |
---|---|---|---|---|---|---|---|
17446137 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
we hypothesized that pyrosequencing to determine kir-ligand status by direct sequencing of the ligand epitope can be done as an alternative to high-resolution hla-typing. | |||||||
17446137 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
pyrosequencing is rapid and would be particularly useful in analysis of retrospective cohorts where high-resolution hla-typing is unavailable or too expensive. | |||||||
17446137 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
primer binding to invariant regions without known snps was critical for kir-ligand assignment by pyrosequencing to be in full concordance with high-resolution hla-typing. | |||||||
20650293 | HLA-CLASS I (HLA CLASS II) | pyrose | NA | NA | NA | unclassified | |
a novel single cdna amplicon pyrosequencing method for high-throughput, cost-effective sequence-based hla class i genotyping. | |||||||
20650293 | HLA-CLASS I (HLA CLASS II) | pyrose | NA | NA | NA | unclassified | |
we present an assay for sequence-based hla genotyping by titanium read length clonal roche/454 pyrosequencing of a single, universally diagnostic polymerase chain reaction (pcr) amplicon from hla class i cdna that captures most of exons 2, 3, and 4 used for traditional sequence-based typing. | |||||||
21299525 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
we conclude that clonal pyrosequencing using the gs flx platform and conexio atf software allows reliable identification of hla genotypes at high resolution. | |||||||
22866951 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
ultra-high resolution hla genotyping and allele discovery by highly multiplexed cdna amplicon pyrosequencing. | |||||||
22866951 | HLA-CLASS I (HLA CLASS II) | pyrose | NA | NA | NA | unclassified | |
we designed a cdna amplicon-based pyrosequencing method to capture 94% of the hla class i open-reading-frame with only two amplicons per sample, and an analogous method for class ii hla genes, with a primary focus on sequencing the drb loci. | |||||||
23274889 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
to exclude secondary effects of diabetes and hla risk genotype on gut microbiota, we compared the intestinal microbiota composition in children with at least two diabetes-associated autoantibodies (n = 18) with autoantibody-negative children matched for age, sex, early feeding history, and hla risk genotype using pyrosequencing. | |||||||
23775738 | HLA (HLA) | pyrose | NA | NA | NA | unclassified | |
a total of 14 hla primer pairs with multiplex identifiers (mids) are used in clonal, amplicon-based pyrosequencing of up to 44 samples per plate using the gs flx. |
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